Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886269.1_cds_XP_016440387.1_35851
CDS Infomation

[gene=LOC107766157] [db_xref=GeneID:107766157] [protein=pectinesterase/pectinesterase inhibitor 18-like] [protein_id=XP_016440387.1] [location=join(34849..35809,36093..36574,42719..42890,42992..43356)] [gbkey=CDS]
Sequence

ATGCCTACTAATTCCTCTCAACCATTGTTAGTAGACACTCCGAAAAGAAAATCCTCTCCT
TCTAAAGCTCTCTATGTTCTTCTCTCCTTAGCTGCTATTGTGGGCTCAGTTGGATTAGTT
TCAATCTGGGCCATCAATGGCAGTAGCCCATCAACTTCCTTGACAGCCGATGTTTGTGAT
CAGGCCCATGATCAGCCATCTTGCTTGACCATGATGTCTGAGGTTGCACCTGCTGGTTCA
ATGAACTCAAAAACAGTGGATTTGTTACAGATGGTTTTGCATAAATCATCGTTAAAAATC
CACGAGACGATCGATTTAGTGAGAAATGTGAACAGTAGGATTAATAATGACAAGGAGCAA
GCAGCTCTAGCAGATTGTCTAGAGTTAATGGATTTGTCAAGGGACAGATTAATGGACTCT
ATGATGTCACTTGGGAACCTATCATCCCAAGCCCATTTTGATGTCCATACATGGCTAAGT
AGCATTCTGACTAACCATGTTACTTGCAAAGATGGGCTAAATGCTCAGGCCCAGTCCATT
ATGAAGCCCATGTTGAAGGATTTGATAGCAAGGGCAAAGACTTCCTTAGCCTTGATGGTT
AAAATGGCACCATCCAATACCATGGATCTTCCATCAGTTACTGATGGAATGCCCTCATGG
GTTACTTCTAATGATAGAAGGCTTTTGCAACTTTCTGCAAATGCCATAACAGCCAATGTT
GTAGTGGCTAAAGATGGTAGCGGAAAATTCAAGACTGTAAAGGAAGCAGTTGCATCTGCT
CCAGATAATGGCAAGACTCGTTATGTTATATATGTGAAAAAAGGAATATACAAAGAGAAT
GTTGAGATTGGGAAAAAGAAGAAAAATGTGATGCTTGTTGGTGATGGTATGGATACTACT
ATTATCACTGGCAACTTGAATGTTGTCGATGGTGCAACAACCTTCAACTCTGCAACCGTT
GCTGCTGTTGGGGATGGATTCATAGCCCAAGATCTGCAGTTTCAAAACACGGCAGGACCA
GCAAAACACCAAGCAGTGGCGCTTCGTGTAGGAGCAGATCAATCAGTCATCAATCGTTGC
ATAATAGATGCATTCCAAGACACCCTCTACACTCACAGCCTTCGTCAATTCTATAGAGAT
TGTTACATCGCTGGCACTGTTGATTTCATCTTTGGTAATGCTGCAGTTGTGTTCCAAAAC
TCAAAAATCGCAGCACGAAAGCCCGGGAGTGGACAAAAGAACATGGTTACAGCTCAAGGT
CGTGAAGATCCAAACCAAAATACAGGAACTTCAATCCAAAATTGTGACATTATTGCTAGC
TCAGACCTTGCACCAGTGAAAGGGTCGGTTAAGACATATTTGGGCCGTCCATGGAAAGCG
TACTCACGAACTGTATTTATGCAGTCCAATATTGGAGACCATATTGACCCAGAAGGTTGG
TCAATTTTCCCTATGGCATTTGGGGTAGCGGATTCAGAGAATAACGAATCATATGAATGG
TACTTCAGAGAATTAAGAAAAGCAATTGGCATTCGTAAAGATTTAATATTTTTGTCAGAT
CGATACAAGGCCATTGCAAATGGAATTGCAAATGTTTTCCCTGAGTGCTACCATGAATCT
GATGACCTTATGTCCCAAATAGCTGTTGTTGATAAGAAAACATTCGACTATTTGATGGAG
GAACCACCAGGAAGATGGGCTCGTTCACATTGTCCAAGACGACGATATGATATGCTAACA
AAAAATATTGTTGAGTCAATGAATAATGTTTTGAGACGTGCAAGAGAATTGCCACTTTTA
ATAATGATGGATTTTATACAAGAAAAATTACAAATCTGGTTCTATGACAGAAGGACATCA
ACAGAAGGAATATTCCGTGAATTATCAAATTGGGTAGAAGCAACATTAGAAGACAAAATT
AAACCAGCTTTTACATTTAGAGTATTGCCCATTGATCGACTCAAATTCAAAGTCAAATAA

Peptide Sequence

PEP ID

XP_016440387.1
PEP Infomation

PREDICTED: pectinesterase/pectinesterase inhibitor 18-like [Nicotiana tabacum]
Sequence

MPTNSSQPLLVDTPKRKSSPSKALYVLLSLAAIVGSVGLVSIWAINGSSPSTSLTADVCD
QAHDQPSCLTMMSEVAPAGSMNSKTVDLLQMVLHKSSLKIHETIDLVRNVNSRINNDKEQ
AALADCLELMDLSRDRLMDSMMSLGNLSSQAHFDVHTWLSSILTNHVTCKDGLNAQAQSI
MKPMLKDLIARAKTSLALMVKMAPSNTMDLPSVTDGMPSWVTSNDRRLLQLSANAITANV
VVAKDGSGKFKTVKEAVASAPDNGKTRYVIYVKKGIYKENVEIGKKKKNVMLVGDGMDTT
IITGNLNVVDGATTFNSATVAAVGDGFIAQDLQFQNTAGPAKHQAVALRVGADQSVINRC
IIDAFQDTLYTHSLRQFYRDCYIAGTVDFIFGNAAVVFQNSKIAARKPGSGQKNMVTAQG
REDPNQNTGTSIQNCDIIASSDLAPVKGSVKTYLGRPWKAYSRTVFMQSNIGDHIDPEGW
SIFPMAFGVADSENNESYEWYFRELRKAIGIRKDLIFLSDRYKAIANGIANVFPECYHES
DDLMSQIAVVDKKTFDYLMEEPPGRWARSHCPRRRYDMLTKNIVESMNNVLRRARELPLL
IMMDFIQEKLQIWFYDRRTSTEGIFRELSNWVEATLEDKIKPAFTFRVLPIDRLKFKVK

Transcript Sequence

Gene sequence data has not been registered.